Syntax for UNIANOVA in R












1














I am trying to replicate the following SPSS Syntax for type I unianova in R



UNIANOVA FinH BY Site Provenance Block Genotype WITH SoilNkh dDDSP dDDSP2

/RANDOM=Block Genotype

/METHOD=SSTYPE(1)

/INTERCEPT=INCLUDE

/POSTHOC=Site (SNK) 

/SAVE=PRED RESID

/CRITERIA=ALPHA(0.05)

/DESIGN=SoilNkh Site dDDSP dDDSP2 Provenance Provenance*Site Genotype(Provenance)

Block(Site).


Where Site and Provenance are fixed, Genotype nested in Provenance and Block nested in Site are random and dDDSP, dDDSP2 and SoilNkh. It should be type I ANOVA.



The best I can come up with as far as R-syntax goes is



m11 <- lme(FinH ~ 1 + SoilNkh + Site + dDDSP + dDDSP2 + Provenance + Site:Provenance, 

    random = (1|Provenance/Genotype) + (1|Site/Block), data=spss)

Anova(m11,type="I")


and quite a few varieties (which shouldn't be possible :) ), but to no avail. I also got lost in everything Google has got to offer on the subject, frankly.



I'd greatly appreciate any help on translating the syntax.



Thanks in advance!






r syntax spss lm anova







share|improve this question



























    1














    I am trying to replicate the following SPSS Syntax for type I unianova in R



    UNIANOVA FinH BY Site Provenance Block Genotype WITH SoilNkh dDDSP dDDSP2
    
/RANDOM=Block Genotype
    
/METHOD=SSTYPE(1)
    
/INTERCEPT=INCLUDE
    
/POSTHOC=Site (SNK) 
    
/SAVE=PRED RESID
    
/CRITERIA=ALPHA(0.05)
    
/DESIGN=SoilNkh Site dDDSP dDDSP2 Provenance Provenance*Site Genotype(Provenance)
    
Block(Site).


    Where Site and Provenance are fixed, Genotype nested in Provenance and Block nested in Site are random and dDDSP, dDDSP2 and SoilNkh. It should be type I ANOVA.



    The best I can come up with as far as R-syntax goes is



    m11 <- lme(FinH ~ 1 + SoilNkh + Site + dDDSP + dDDSP2 + Provenance + Site:Provenance, 
    
    random = (1|Provenance/Genotype) + (1|Site/Block), data=spss)
    
Anova(m11,type="I")


    and quite a few varieties (which shouldn't be possible :) ), but to no avail. I also got lost in everything Google has got to offer on the subject, frankly.



    I'd greatly appreciate any help on translating the syntax.



    Thanks in advance!






    r syntax spss lm anova







    share|improve this question

























      1












      1








      1







      I am trying to replicate the following SPSS Syntax for type I unianova in R



      UNIANOVA FinH BY Site Provenance Block Genotype WITH SoilNkh dDDSP dDDSP2
      
/RANDOM=Block Genotype
      
/METHOD=SSTYPE(1)
      
/INTERCEPT=INCLUDE
      
/POSTHOC=Site (SNK) 
      
/SAVE=PRED RESID
      
/CRITERIA=ALPHA(0.05)
      
/DESIGN=SoilNkh Site dDDSP dDDSP2 Provenance Provenance*Site Genotype(Provenance)
      
Block(Site).


      Where Site and Provenance are fixed, Genotype nested in Provenance and Block nested in Site are random and dDDSP, dDDSP2 and SoilNkh. It should be type I ANOVA.



      The best I can come up with as far as R-syntax goes is



      m11 <- lme(FinH ~ 1 + SoilNkh + Site + dDDSP + dDDSP2 + Provenance + Site:Provenance, 
      
    random = (1|Provenance/Genotype) + (1|Site/Block), data=spss)
      
Anova(m11,type="I")


      and quite a few varieties (which shouldn't be possible :) ), but to no avail. I also got lost in everything Google has got to offer on the subject, frankly.



      I'd greatly appreciate any help on translating the syntax.



      Thanks in advance!






      r syntax spss lm anova







      share|improve this question













      I am trying to replicate the following SPSS Syntax for type I unianova in R



      UNIANOVA FinH BY Site Provenance Block Genotype WITH SoilNkh dDDSP dDDSP2
      
/RANDOM=Block Genotype
      
/METHOD=SSTYPE(1)
      
/INTERCEPT=INCLUDE
      
/POSTHOC=Site (SNK) 
      
/SAVE=PRED RESID
      
/CRITERIA=ALPHA(0.05)
      
/DESIGN=SoilNkh Site dDDSP dDDSP2 Provenance Provenance*Site Genotype(Provenance)
      
Block(Site).


      Where Site and Provenance are fixed, Genotype nested in Provenance and Block nested in Site are random and dDDSP, dDDSP2 and SoilNkh. It should be type I ANOVA.



      The best I can come up with as far as R-syntax goes is



      m11 <- lme(FinH ~ 1 + SoilNkh + Site + dDDSP + dDDSP2 + Provenance + Site:Provenance, 
      
    random = (1|Provenance/Genotype) + (1|Site/Block), data=spss)
      
Anova(m11,type="I")


      and quite a few varieties (which shouldn't be possible :) ), but to no avail. I also got lost in everything Google has got to offer on the subject, frankly.



      I'd greatly appreciate any help on translating the syntax.



      Thanks in advance!






      r syntax spss lm anova




      r syntax spss lm anova






      share|improve this question













      share|improve this question











      share|improve this question




      share|improve this question










      asked Nov 19 '18 at 20:35









      B.J.H.M. PossenB.J.H.M. Possen

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