'repl_python()' fails to import python modules to R

0

I am attempting to use repl_python() to interactively use python in my R environment. Unfortunately I'm not making much progress. Any ideas? I checked out Importing python module in R but my R environment is connecting to the correct python path (I think).

library(reticulate)

repl_python()

  Python 3.7.1 (/anaconda3/envs/r-reticulate/bin/python)

  Reticulate 1.10 REPL -- A Python interpreter in R.

>>> import pandas as pd

  ModuleNotFoundError: No module named 'pandas'

Here's my R session info:

sessionInfo()

R version 3.5.1 (2018-07-02)

Platform: x86_64-apple-darwin15.6.0 (64-bit)

Running under: macOS High Sierra 10.13.6



Matrix products: default

BLAS: /System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vecLib.framework/Versions/A/libBLAS.dylib

LAPACK: /Library/Frameworks/R.framework/Versions/3.5/Resources/lib/libRlapack.dylib



locale:

[1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8



attached base packages:

[1] stats     graphics  grDevices utils     datasets  methods  

[7] base     



other attached packages:

[1] reticulate_1.10



loaded via a namespace (and not attached):

 [1] Rcpp_1.0.0        urca_1.3-0        pillar_1.3.0     

 [4] compiler_3.5.1    plyr_1.8.4        bindr_0.1.1      

 [7] tseries_0.10-46   tools_3.5.1       xts_0.11-2       

[10] jsonlite_1.6      nlme_3.1-137      tibble_1.4.2     

[13] gtable_0.2.0      lattice_0.20-35   pkgconfig_2.0.2  

[16] rlang_0.3.0.1     Matrix_1.2-14     rstudioapi_0.8   

[19] curl_3.2          parallel_3.5.1    bindrcpp_0.2.2   

[22] knitr_1.20        dplyr_0.7.8       uroot_2.0-9      

[25] lmtest_0.9-36     grid_3.5.1        nnet_7.3-12      

[28] forecast_8.4      tidyselect_0.2.5  glue_1.3.0       

[31] R6_2.3.0          ggplot2_3.1.0     purrr_0.2.5      

[34] TTR_0.23-4        magrittr_1.5      scales_1.0.0     

[37] assertthat_0.2.0  quantmod_0.4-13   timeDate_3043.102

[40] colorspace_1.3-2  fracdiff_1.4-2    quadprog_1.5-5   

[43] lazyeval_0.2.1    munsell_0.5.0     crayon_1.3.4     

[46] zoo_1.8-4  

python r reticulate

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asked Jan 1 at 23:45

Cyrus MohammadianCyrus Mohammadian

2,60631943

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0

I am attempting to use repl_python() to interactively use python in my R environment. Unfortunately I'm not making much progress. Any ideas? I checked out Importing python module in R but my R environment is connecting to the correct python path (I think).

library(reticulate)

repl_python()

  Python 3.7.1 (/anaconda3/envs/r-reticulate/bin/python)

  Reticulate 1.10 REPL -- A Python interpreter in R.

>>> import pandas as pd

  ModuleNotFoundError: No module named 'pandas'

Here's my R session info:

sessionInfo()

R version 3.5.1 (2018-07-02)

Platform: x86_64-apple-darwin15.6.0 (64-bit)

Running under: macOS High Sierra 10.13.6



Matrix products: default

BLAS: /System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vecLib.framework/Versions/A/libBLAS.dylib

LAPACK: /Library/Frameworks/R.framework/Versions/3.5/Resources/lib/libRlapack.dylib



locale:

[1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8



attached base packages:

[1] stats     graphics  grDevices utils     datasets  methods  

[7] base     



other attached packages:

[1] reticulate_1.10



loaded via a namespace (and not attached):

 [1] Rcpp_1.0.0        urca_1.3-0        pillar_1.3.0     

 [4] compiler_3.5.1    plyr_1.8.4        bindr_0.1.1      

 [7] tseries_0.10-46   tools_3.5.1       xts_0.11-2       

[10] jsonlite_1.6      nlme_3.1-137      tibble_1.4.2     

[13] gtable_0.2.0      lattice_0.20-35   pkgconfig_2.0.2  

[16] rlang_0.3.0.1     Matrix_1.2-14     rstudioapi_0.8   

[19] curl_3.2          parallel_3.5.1    bindrcpp_0.2.2   

[22] knitr_1.20        dplyr_0.7.8       uroot_2.0-9      

[25] lmtest_0.9-36     grid_3.5.1        nnet_7.3-12      

[28] forecast_8.4      tidyselect_0.2.5  glue_1.3.0       

[31] R6_2.3.0          ggplot2_3.1.0     purrr_0.2.5      

[34] TTR_0.23-4        magrittr_1.5      scales_1.0.0     

[37] assertthat_0.2.0  quantmod_0.4-13   timeDate_3043.102

[40] colorspace_1.3-2  fracdiff_1.4-2    quadprog_1.5-5   

[43] lazyeval_0.2.1    munsell_0.5.0     crayon_1.3.4     

[46] zoo_1.8-4  

python r reticulate

share|improve this question

asked Jan 1 at 23:45

Cyrus MohammadianCyrus Mohammadian

2,60631943

add a comment | 

0

0

0

I am attempting to use repl_python() to interactively use python in my R environment. Unfortunately I'm not making much progress. Any ideas? I checked out Importing python module in R but my R environment is connecting to the correct python path (I think).

library(reticulate)

repl_python()

  Python 3.7.1 (/anaconda3/envs/r-reticulate/bin/python)

  Reticulate 1.10 REPL -- A Python interpreter in R.

>>> import pandas as pd

  ModuleNotFoundError: No module named 'pandas'

Here's my R session info:

sessionInfo()

R version 3.5.1 (2018-07-02)

Platform: x86_64-apple-darwin15.6.0 (64-bit)

Running under: macOS High Sierra 10.13.6



Matrix products: default

BLAS: /System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vecLib.framework/Versions/A/libBLAS.dylib

LAPACK: /Library/Frameworks/R.framework/Versions/3.5/Resources/lib/libRlapack.dylib



locale:

[1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8



attached base packages:

[1] stats     graphics  grDevices utils     datasets  methods  

[7] base     



other attached packages:

[1] reticulate_1.10



loaded via a namespace (and not attached):

 [1] Rcpp_1.0.0        urca_1.3-0        pillar_1.3.0     

 [4] compiler_3.5.1    plyr_1.8.4        bindr_0.1.1      

 [7] tseries_0.10-46   tools_3.5.1       xts_0.11-2       

[10] jsonlite_1.6      nlme_3.1-137      tibble_1.4.2     

[13] gtable_0.2.0      lattice_0.20-35   pkgconfig_2.0.2  

[16] rlang_0.3.0.1     Matrix_1.2-14     rstudioapi_0.8   

[19] curl_3.2          parallel_3.5.1    bindrcpp_0.2.2   

[22] knitr_1.20        dplyr_0.7.8       uroot_2.0-9      

[25] lmtest_0.9-36     grid_3.5.1        nnet_7.3-12      

[28] forecast_8.4      tidyselect_0.2.5  glue_1.3.0       

[31] R6_2.3.0          ggplot2_3.1.0     purrr_0.2.5      

[34] TTR_0.23-4        magrittr_1.5      scales_1.0.0     

[37] assertthat_0.2.0  quantmod_0.4-13   timeDate_3043.102

[40] colorspace_1.3-2  fracdiff_1.4-2    quadprog_1.5-5   

[43] lazyeval_0.2.1    munsell_0.5.0     crayon_1.3.4     

[46] zoo_1.8-4  

python r reticulate

share|improve this question

asked Jan 1 at 23:45

Cyrus MohammadianCyrus Mohammadian

2,60631943

I am attempting to use repl_python() to interactively use python in my R environment. Unfortunately I'm not making much progress. Any ideas? I checked out Importing python module in R but my R environment is connecting to the correct python path (I think).

library(reticulate)

repl_python()

  Python 3.7.1 (/anaconda3/envs/r-reticulate/bin/python)

  Reticulate 1.10 REPL -- A Python interpreter in R.

>>> import pandas as pd

  ModuleNotFoundError: No module named 'pandas'

Here's my R session info:

sessionInfo()

R version 3.5.1 (2018-07-02)

Platform: x86_64-apple-darwin15.6.0 (64-bit)

Running under: macOS High Sierra 10.13.6



Matrix products: default

BLAS: /System/Library/Frameworks/Accelerate.framework/Versions/A/Frameworks/vecLib.framework/Versions/A/libBLAS.dylib

LAPACK: /Library/Frameworks/R.framework/Versions/3.5/Resources/lib/libRlapack.dylib



locale:

[1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8



attached base packages:

[1] stats     graphics  grDevices utils     datasets  methods  

[7] base     



other attached packages:

[1] reticulate_1.10



loaded via a namespace (and not attached):

 [1] Rcpp_1.0.0        urca_1.3-0        pillar_1.3.0     

 [4] compiler_3.5.1    plyr_1.8.4        bindr_0.1.1      

 [7] tseries_0.10-46   tools_3.5.1       xts_0.11-2       

[10] jsonlite_1.6      nlme_3.1-137      tibble_1.4.2     

[13] gtable_0.2.0      lattice_0.20-35   pkgconfig_2.0.2  

[16] rlang_0.3.0.1     Matrix_1.2-14     rstudioapi_0.8   

[19] curl_3.2          parallel_3.5.1    bindrcpp_0.2.2   

[22] knitr_1.20        dplyr_0.7.8       uroot_2.0-9      

[25] lmtest_0.9-36     grid_3.5.1        nnet_7.3-12      

[28] forecast_8.4      tidyselect_0.2.5  glue_1.3.0       

[31] R6_2.3.0          ggplot2_3.1.0     purrr_0.2.5      

[34] TTR_0.23-4        magrittr_1.5      scales_1.0.0     

[37] assertthat_0.2.0  quantmod_0.4-13   timeDate_3043.102

[40] colorspace_1.3-2  fracdiff_1.4-2    quadprog_1.5-5   

[43] lazyeval_0.2.1    munsell_0.5.0     crayon_1.3.4     

[46] zoo_1.8-4  

python r reticulate

python r reticulate

share|improve this question

asked Jan 1 at 23:45

Cyrus MohammadianCyrus Mohammadian

2,60631943

share|improve this question

asked Jan 1 at 23:45

Cyrus MohammadianCyrus Mohammadian

2,60631943

share|improve this question

share|improve this question

asked Jan 1 at 23:45

Cyrus MohammadianCyrus Mohammadian

2,60631943

asked Jan 1 at 23:45

Cyrus MohammadianCyrus Mohammadian

2,60631943

asked Jan 1 at 23:45

Cyrus MohammadianCyrus Mohammadian

2,60631943

2,60631943

add a comment | 

add a comment | 

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