Mixing
Macro for multiple images analysis in the calculator plus
0
I have a set of images in a folder which their names are: 2 days.bmp 3 days.bmp ..... 28 days.bmp. Also, I have a folder with the background images exactly with the same names. I want to use the calculator plus and divide each image to its relevant background. I want to save time and do that at the same time instead of doing it for each image one by one. Is there any idea how can I do that? I have written a macro but it didn't work for me.
macro "Batch calculate images [1]" {
LocationOfFiles = getDirectory("Select Folder");
LocationOfbackgrounds = getDirectory("Select Folder of backgrounds");
LocationOfSave = getDirectory("Select Save Location");
setBatchMode(true);
FileList = getFileList(LocationOfFiles);
NumberOfFiles = FileList.length;
for (i=0; i<NumberOfFiles; i+=1) {
FileName = FileList[i];
pathtofile1 = LocationOfFiles+FileName;
open(pathtofile1);
name1 = getTitle();
pathtofile2 = LocationOfbackgrounds+FileName;
open(pathtofile2);
name2 = getTitle();
run("Calculator Plus", "i1="+name1+" i2="+name2+" operation=[Divide: i2 = (i1/i2) x k1 + k2] k1=255 k2=0 create");
selectWindow("Result");
SaveName = replace(name, ".bmp", "_backgroud subtracted.jpg");
saveAs("BMP", LocationOfSave+SaveName);
selectWindow(BackgroundImage);
close("\Others");
macros imagej imagej-macro
edited Nov 20 '18 at 4:37
Cœur
17.5k9104145
asked Nov 19 '18 at 23:38
Amir BehravanAmir Behravan
11
add a comment |
0
I have a set of images in a folder which their names are: 2 days.bmp 3 days.bmp ..... 28 days.bmp. Also, I have a folder with the background images exactly with the same names. I want to use the calculator plus and divide each image to its relevant background. I want to save time and do that at the same time instead of doing it for each image one by one. Is there any idea how can I do that? I have written a macro but it didn't work for me.
macro "Batch calculate images [1]" {
LocationOfFiles = getDirectory("Select Folder");
LocationOfbackgrounds = getDirectory("Select Folder of backgrounds");
LocationOfSave = getDirectory("Select Save Location");
setBatchMode(true);
FileList = getFileList(LocationOfFiles);
NumberOfFiles = FileList.length;
for (i=0; i<NumberOfFiles; i+=1) {
FileName = FileList[i];
pathtofile1 = LocationOfFiles+FileName;
open(pathtofile1);
name1 = getTitle();
pathtofile2 = LocationOfbackgrounds+FileName;
open(pathtofile2);
name2 = getTitle();
run("Calculator Plus", "i1="+name1+" i2="+name2+" operation=[Divide: i2 = (i1/i2) x k1 + k2] k1=255 k2=0 create");
selectWindow("Result");
SaveName = replace(name, ".bmp", "_backgroud subtracted.jpg");
saveAs("BMP", LocationOfSave+SaveName);
selectWindow(BackgroundImage);
close("\Others");
macros imagej imagej-macro
edited Nov 20 '18 at 4:37
Cœur
17.5k9104145
asked Nov 19 '18 at 23:38
Amir BehravanAmir Behravan
11
1
I recommend to ask this question on the image.sc forum, as it is very specific to ImageJ and its macro language: forum.image.sc
– Jan Eglinger
Nov 20 '18 at 8:14
1
The question is ImageJ-specific and likely a bit off-topic here. In addition, that same question was asked on the forum and the mailing list and received replies there already, so let's close it here.
– Jan Eglinger
Nov 20 '18 at 12:11
add a comment |
0
0
0
I have a set of images in a folder which their names are: 2 days.bmp 3 days.bmp ..... 28 days.bmp. Also, I have a folder with the background images exactly with the same names. I want to use the calculator plus and divide each image to its relevant background. I want to save time and do that at the same time instead of doing it for each image one by one. Is there any idea how can I do that? I have written a macro but it didn't work for me.
macro "Batch calculate images [1]" {
LocationOfFiles = getDirectory("Select Folder");
LocationOfbackgrounds = getDirectory("Select Folder of backgrounds");
LocationOfSave = getDirectory("Select Save Location");
setBatchMode(true);
FileList = getFileList(LocationOfFiles);
NumberOfFiles = FileList.length;
for (i=0; i<NumberOfFiles; i+=1) {
FileName = FileList[i];
pathtofile1 = LocationOfFiles+FileName;
open(pathtofile1);
name1 = getTitle();
pathtofile2 = LocationOfbackgrounds+FileName;
open(pathtofile2);
name2 = getTitle();
run("Calculator Plus", "i1="+name1+" i2="+name2+" operation=[Divide: i2 = (i1/i2) x k1 + k2] k1=255 k2=0 create");
selectWindow("Result");
SaveName = replace(name, ".bmp", "_backgroud subtracted.jpg");
saveAs("BMP", LocationOfSave+SaveName);
selectWindow(BackgroundImage);
close("\Others");
macros imagej imagej-macro
edited Nov 20 '18 at 4:37
Cœur
17.5k9104145
asked Nov 19 '18 at 23:38
Amir BehravanAmir Behravan
11
I have a set of images in a folder which their names are: 2 days.bmp 3 days.bmp ..... 28 days.bmp. Also, I have a folder with the background images exactly with the same names. I want to use the calculator plus and divide each image to its relevant background. I want to save time and do that at the same time instead of doing it for each image one by one. Is there any idea how can I do that? I have written a macro but it didn't work for me.
macro "Batch calculate images [1]" {
LocationOfFiles = getDirectory("Select Folder");
LocationOfbackgrounds = getDirectory("Select Folder of backgrounds");
LocationOfSave = getDirectory("Select Save Location");
setBatchMode(true);
FileList = getFileList(LocationOfFiles);
NumberOfFiles = FileList.length;
for (i=0; i<NumberOfFiles; i+=1) {
FileName = FileList[i];
pathtofile1 = LocationOfFiles+FileName;
open(pathtofile1);
name1 = getTitle();
pathtofile2 = LocationOfbackgrounds+FileName;
open(pathtofile2);
name2 = getTitle();
run("Calculator Plus", "i1="+name1+" i2="+name2+" operation=[Divide: i2 = (i1/i2) x k1 + k2] k1=255 k2=0 create");
selectWindow("Result");
SaveName = replace(name, ".bmp", "_backgroud subtracted.jpg");
saveAs("BMP", LocationOfSave+SaveName);
selectWindow(BackgroundImage);
close("\Others");
macros imagej imagej-macro
macros imagej imagej-macro
edited Nov 20 '18 at 4:37
Cœur
17.5k9104145
asked Nov 19 '18 at 23:38
Amir BehravanAmir Behravan
11
edited Nov 20 '18 at 4:37
Cœur
17.5k9104145
asked Nov 19 '18 at 23:38
Amir BehravanAmir Behravan
11
edited Nov 20 '18 at 4:37
Cœur
17.5k9104145
edited Nov 20 '18 at 4:37
Cœur
17.5k9104145
edited Nov 20 '18 at 4:37
Cœur
17.5k9104145
17.5k9104145
asked Nov 19 '18 at 23:38
Amir BehravanAmir Behravan
11
asked Nov 19 '18 at 23:38
Amir BehravanAmir Behravan
11
asked Nov 19 '18 at 23:38
Amir BehravanAmir Behravan
11
11
1
I recommend to ask this question on the image.sc forum, as it is very specific to ImageJ and its macro language: forum.image.sc
– Jan Eglinger
Nov 20 '18 at 8:14
1
The question is ImageJ-specific and likely a bit off-topic here. In addition, that same question was asked on the forum and the mailing list and received replies there already, so let's close it here.
– Jan Eglinger
Nov 20 '18 at 12:11
add a comment |
1
I recommend to ask this question on the image.sc forum, as it is very specific to ImageJ and its macro language: forum.image.sc
– Jan Eglinger
Nov 20 '18 at 8:14
1
The question is ImageJ-specific and likely a bit off-topic here. In addition, that same question was asked on the forum and the mailing list and received replies there already, so let's close it here.
– Jan Eglinger
Nov 20 '18 at 12:11
1
1
I recommend to ask this question on the image.sc forum, as it is very specific to ImageJ and its macro language: forum.image.sc
– Jan Eglinger
Nov 20 '18 at 8:14
I recommend to ask this question on the image.sc forum, as it is very specific to ImageJ and its macro language: forum.image.sc
– Jan Eglinger
Nov 20 '18 at 8:14
1
1
The question is ImageJ-specific and likely a bit off-topic here. In addition, that same question was asked on the forum and the mailing list and received replies there already, so let's close it here.
– Jan Eglinger
Nov 20 '18 at 12:11
The question is ImageJ-specific and likely a bit off-topic here. In addition, that same question was asked on the forum and the mailing list and received replies there already, so let's close it here.
– Jan Eglinger
Nov 20 '18 at 12:11
add a comment |
0
active
oldest
votes
Your Answer
StackExchange.ifUsing("editor", function () {
StackExchange.using("externalEditor", function () {
StackExchange.using("snippets", function () {
StackExchange.snippets.init();
});
});
}, "code-snippets");
StackExchange.ready(function() {
var channelOptions = {
tags: "".split(" "),
id: "1"
};
initTagRenderer("".split(" "), "".split(" "), channelOptions);
StackExchange.using("externalEditor", function() {
// Have to fire editor after snippets, if snippets enabled
if (StackExchange.settings.snippets.snippetsEnabled) {
StackExchange.using("snippets", function() {
createEditor();
});
}
else {
createEditor();
}
});
function createEditor() {
StackExchange.prepareEditor({
heartbeatType: 'answer',
autoActivateHeartbeat: false,
convertImagesToLinks: true,
noModals: true,
showLowRepImageUploadWarning: true,
reputationToPostImages: 10,
bindNavPrevention: true,
postfix: "",
imageUploader: {
brandingHtml: "Powered by u003ca class="icon-imgur-white" href="https://imgur.com/"u003eu003c/au003e",
contentPolicyHtml: "User contributions licensed under u003ca href="https://creativecommons.org/licenses/by-sa/3.0/"u003ecc by-sa 3.0 with attribution requiredu003c/au003e u003ca href="https://stackoverflow.com/legal/content-policy"u003e(content policy)u003c/au003e",
allowUrls: true
},
onDemand: true,
discardSelector: ".discard-answer"
,immediatelyShowMarkdownHelp:true
});
}
});
draft saved
draft discarded
Sign up or log in
StackExchange.ready(function () {
StackExchange.helpers.onClickDraftSave('#login-link');
});
Sign up using Google
Sign up using Facebook
Sign up using Email and Password
Post as a guest
Required, but never shown
StackExchange.ready(
function () {
StackExchange.openid.initPostLogin('.new-post-login', 'https%3a%2f%2fstackoverflow.com%2fquestions%2f53384207%2fmacro-for-multiple-images-analysis-in-the-calculator-plus%23new-answer', 'question_page');
}
);
Post as a guest
Required, but never shown
0
active
oldest
votes
0
active
oldest
votes
active
oldest
votes
active
oldest
votes
draft saved
draft discarded
Thanks for contributing an answer to Stack Overflow!
- Please be sure to answer the question. Provide details and share your research!
But avoid …
- Asking for help, clarification, or responding to other answers.
- Making statements based on opinion; back them up with references or personal experience.
To learn more, see our tips on writing great answers.
draft saved
draft discarded
Sign up or log in
StackExchange.ready(function () {
StackExchange.helpers.onClickDraftSave('#login-link');
});
Sign up using Google
Sign up using Facebook
Sign up using Email and Password
Post as a guest
Required, but never shown
StackExchange.ready(
function () {
StackExchange.openid.initPostLogin('.new-post-login', 'https%3a%2f%2fstackoverflow.com%2fquestions%2f53384207%2fmacro-for-multiple-images-analysis-in-the-calculator-plus%23new-answer', 'question_page');
}
);
Post as a guest
Required, but never shown
Sign up or log in
StackExchange.ready(function () {
StackExchange.helpers.onClickDraftSave('#login-link');
});
Sign up using Google
Sign up using Facebook
Sign up using Email and Password
Post as a guest
Required, but never shown
Sign up or log in
StackExchange.ready(function () {
StackExchange.helpers.onClickDraftSave('#login-link');
});
Sign up using Google
Sign up using Facebook
Sign up using Email and Password
Post as a guest
Required, but never shown
Sign up or log in
StackExchange.ready(function () {
StackExchange.helpers.onClickDraftSave('#login-link');
});
Sign up using Google
Sign up using Facebook
Sign up using Email and Password
Sign up using Google
Sign up using Facebook
Sign up using Email and Password
Post as a guest
Required, but never shown
Required, but never shown
Required, but never shown
Required, but never shown
Required, but never shown
Required, but never shown
Required, but never shown
Required, but never shown
Required, but never shown
1
I recommend to ask this question on the image.sc forum, as it is very specific to ImageJ and its macro language: forum.image.sc
– Jan Eglinger
Nov 20 '18 at 8:14
1
The question is ImageJ-specific and likely a bit off-topic here. In addition, that same question was asked on the forum and the mailing list and received replies there already, so let's close it here.
– Jan Eglinger
Nov 20 '18 at 12:11