Mixing
Error while reading .h5 file using the rhdf5 package in R
.everyoneloves__top-leaderboard:empty,.everyoneloves__mid-leaderboard:empty,.everyoneloves__bot-mid-leaderboard:empty{ height:90px;width:728px;box-sizing:border-box;
}
I'm importing a .h5 file into R by using the rhdf5 package. But a warning message showed and I found the DATE_TIME column of my data is NA when I view the imported file.
Warning message:
In H5Dread(h5dataset = h5dataset, h5spaceFile = h5spaceFile, h5spaceMem = h5spaceMem, :
h5read for type 'TIME' not yet implemented. Values replaced by NA's.
It's all normal when I use Vitables (Python) to open the .h5 file. But the DATE_TIME column is NA with HDFViewer open it.
My code is:
library(rhdf5)
test <- h5read("mytestdata.h5", "/results")
View(mydatatest)
I want to use R to open .h5 file. Please give me some help!
Thanks in advance!
r hdf5 rhdf5
edited Jan 8 at 13:35
Yossarian
3,66512746
asked Jan 3 at 6:59
Haoyu DiaoHaoyu Diao
1
add a comment |
I'm importing a .h5 file into R by using the rhdf5 package. But a warning message showed and I found the DATE_TIME column of my data is NA when I view the imported file.
Warning message:
In H5Dread(h5dataset = h5dataset, h5spaceFile = h5spaceFile, h5spaceMem = h5spaceMem, :
h5read for type 'TIME' not yet implemented. Values replaced by NA's.
It's all normal when I use Vitables (Python) to open the .h5 file. But the DATE_TIME column is NA with HDFViewer open it.
My code is:
library(rhdf5)
test <- h5read("mytestdata.h5", "/results")
View(mydatatest)
I want to use R to open .h5 file. Please give me some help!
Thanks in advance!
r hdf5 rhdf5
edited Jan 8 at 13:35
Yossarian
3,66512746
asked Jan 3 at 6:59
Haoyu DiaoHaoyu Diao
1
What is the type of theDATE_TIMEcolumn? And what version of rhdf5 are you using? It sounds like it doesn't understand how to read that type.
– Yossarian
Jan 8 at 13:39
add a comment |
I'm importing a .h5 file into R by using the rhdf5 package. But a warning message showed and I found the DATE_TIME column of my data is NA when I view the imported file.
Warning message:
In H5Dread(h5dataset = h5dataset, h5spaceFile = h5spaceFile, h5spaceMem = h5spaceMem, :
h5read for type 'TIME' not yet implemented. Values replaced by NA's.
It's all normal when I use Vitables (Python) to open the .h5 file. But the DATE_TIME column is NA with HDFViewer open it.
My code is:
library(rhdf5)
test <- h5read("mytestdata.h5", "/results")
View(mydatatest)
I want to use R to open .h5 file. Please give me some help!
Thanks in advance!
r hdf5 rhdf5
edited Jan 8 at 13:35
Yossarian
3,66512746
asked Jan 3 at 6:59
Haoyu DiaoHaoyu Diao
1
I'm importing a .h5 file into R by using the rhdf5 package. But a warning message showed and I found the DATE_TIME column of my data is NA when I view the imported file.
Warning message:
In H5Dread(h5dataset = h5dataset, h5spaceFile = h5spaceFile, h5spaceMem = h5spaceMem, :
h5read for type 'TIME' not yet implemented. Values replaced by NA's.
It's all normal when I use Vitables (Python) to open the .h5 file. But the DATE_TIME column is NA with HDFViewer open it.
My code is:
library(rhdf5)
test <- h5read("mytestdata.h5", "/results")
View(mydatatest)
I want to use R to open .h5 file. Please give me some help!
Thanks in advance!
r hdf5 rhdf5
r hdf5 rhdf5
edited Jan 8 at 13:35
Yossarian
3,66512746
asked Jan 3 at 6:59
Haoyu DiaoHaoyu Diao
1
edited Jan 8 at 13:35
Yossarian
3,66512746
asked Jan 3 at 6:59
Haoyu DiaoHaoyu Diao
1
edited Jan 8 at 13:35
Yossarian
3,66512746
edited Jan 8 at 13:35
Yossarian
3,66512746
edited Jan 8 at 13:35
Yossarian
3,66512746
3,66512746
asked Jan 3 at 6:59
Haoyu DiaoHaoyu Diao
1
asked Jan 3 at 6:59
Haoyu DiaoHaoyu Diao
1
asked Jan 3 at 6:59
Haoyu DiaoHaoyu Diao
1
1
What is the type of theDATE_TIMEcolumn? And what version of rhdf5 are you using? It sounds like it doesn't understand how to read that type.
– Yossarian
Jan 8 at 13:39
add a comment |
What is the type of theDATE_TIMEcolumn? And what version of rhdf5 are you using? It sounds like it doesn't understand how to read that type.
– Yossarian
Jan 8 at 13:39
What is the type of the
DATE_TIME column? And what version of rhdf5 are you using? It sounds like it doesn't understand how to read that type.– Yossarian
Jan 8 at 13:39
What is the type of the
DATE_TIME column? And what version of rhdf5 are you using? It sounds like it doesn't understand how to read that type.– Yossarian
Jan 8 at 13:39
add a comment |
0
active
oldest
votes
Your Answer
StackExchange.ifUsing("editor", function () {
StackExchange.using("externalEditor", function () {
StackExchange.using("snippets", function () {
StackExchange.snippets.init();
});
});
}, "code-snippets");
StackExchange.ready(function() {
var channelOptions = {
tags: "".split(" "),
id: "1"
};
initTagRenderer("".split(" "), "".split(" "), channelOptions);
StackExchange.using("externalEditor", function() {
// Have to fire editor after snippets, if snippets enabled
if (StackExchange.settings.snippets.snippetsEnabled) {
StackExchange.using("snippets", function() {
createEditor();
});
}
else {
createEditor();
}
});
function createEditor() {
StackExchange.prepareEditor({
heartbeatType: 'answer',
autoActivateHeartbeat: false,
convertImagesToLinks: true,
noModals: true,
showLowRepImageUploadWarning: true,
reputationToPostImages: 10,
bindNavPrevention: true,
postfix: "",
imageUploader: {
brandingHtml: "Powered by u003ca class="icon-imgur-white" href="https://imgur.com/"u003eu003c/au003e",
contentPolicyHtml: "User contributions licensed under u003ca href="https://creativecommons.org/licenses/by-sa/3.0/"u003ecc by-sa 3.0 with attribution requiredu003c/au003e u003ca href="https://stackoverflow.com/legal/content-policy"u003e(content policy)u003c/au003e",
allowUrls: true
},
onDemand: true,
discardSelector: ".discard-answer"
,immediatelyShowMarkdownHelp:true
});
}
});
Sign up or log in
StackExchange.ready(function () {
StackExchange.helpers.onClickDraftSave('#login-link');
});
Sign up using Google
Sign up using Facebook
Sign up using Email and Password
Post as a guest
Required, but never shown
StackExchange.ready(
function () {
StackExchange.openid.initPostLogin('.new-post-login', 'https%3a%2f%2fstackoverflow.com%2fquestions%2f54017672%2ferror-while-reading-h5-file-using-the-rhdf5-package-in-r%23new-answer', 'question_page');
}
);
Post as a guest
Required, but never shown
0
active
oldest
votes
0
active
oldest
votes
active
oldest
votes
active
oldest
votes
Thanks for contributing an answer to Stack Overflow!
- Please be sure to answer the question. Provide details and share your research!
But avoid …
- Asking for help, clarification, or responding to other answers.
- Making statements based on opinion; back them up with references or personal experience.
To learn more, see our tips on writing great answers.
Sign up or log in
StackExchange.ready(function () {
StackExchange.helpers.onClickDraftSave('#login-link');
});
Sign up using Google
Sign up using Facebook
Sign up using Email and Password
Post as a guest
Required, but never shown
StackExchange.ready(
function () {
StackExchange.openid.initPostLogin('.new-post-login', 'https%3a%2f%2fstackoverflow.com%2fquestions%2f54017672%2ferror-while-reading-h5-file-using-the-rhdf5-package-in-r%23new-answer', 'question_page');
}
);
Post as a guest
Required, but never shown
Sign up or log in
StackExchange.ready(function () {
StackExchange.helpers.onClickDraftSave('#login-link');
});
Sign up using Google
Sign up using Facebook
Sign up using Email and Password
Post as a guest
Required, but never shown
Sign up or log in
StackExchange.ready(function () {
StackExchange.helpers.onClickDraftSave('#login-link');
});
Sign up using Google
Sign up using Facebook
Sign up using Email and Password
Post as a guest
Required, but never shown
Sign up or log in
StackExchange.ready(function () {
StackExchange.helpers.onClickDraftSave('#login-link');
});
Sign up using Google
Sign up using Facebook
Sign up using Email and Password
Sign up using Google
Sign up using Facebook
Sign up using Email and Password
Post as a guest
Required, but never shown
Required, but never shown
Required, but never shown
Required, but never shown
Required, but never shown
Required, but never shown
Required, but never shown
Required, but never shown
Required, but never shown
What is the type of the
DATE_TIMEcolumn? And what version of rhdf5 are you using? It sounds like it doesn't understand how to read that type.– Yossarian
Jan 8 at 13:39