Not able to use JohnSnowLabs pretrained model in Zeppelin












0















I want to use the JohnSnowLabs pretrained spell check module in my Zeppelin notebook. As mentioned here I have added com.johnsnowlabs.nlp:spark-nlp_2.11:1.7.3 to the Zeppelin dependency section as shown below:



enter image description here



However, when I try to run the following simple code



import com.johnsnowlabs.nlp.DocumentAssembler
import com.johnsnowlabs.nlp.annotator.NorvigSweetingModel
import com.johnsnowlabs.nlp.annotators.Tokenizer
import org.apache.spark.ml.Pipeline
import com.johnsnowlabs.nlp.Finisher

val df = Seq("tiolt cde", "eefg efa efb").toDF("names")

val nlpPipeline = new Pipeline().setStages(Array(
new DocumentAssembler().setInputCol("names").setOutputCol("document"),
new Tokenizer().setInputCols("document").setOutputCol("tokens"),
NorvigSweetingModel.pretrained().setInputCols("tokens").setOutputCol("corrected"),
new Finisher().setInputCols("corrected")
))

df.transform(df => nlpPipeline.fit(df).transform(df)).show(false)


it gives an error as follows:



org.apache.spark.SparkException: Job aborted due to stage failure: Task 0 in stage 0.0 failed 4 times, most recent failure: Lost task 0.3 in stage 0.0 (TID 3, xxx.xxx.xxx.xxx, executor 0): java.io.FileNotFoundException: File file:/root/cache_pretrained/spell_fast_en_1.6.2_2_1534781328404/metadata/part-00000 does not exist
at org.apache.hadoop.fs.RawLocalFileSystem.deprecatedGetFileStatus(RawLocalFileSystem.java:611)
at org.apache.hadoop.fs.RawLocalFileSystem.getFileLinkStatusInternal(RawLocalFileSystem.java:824)
at org.apache.hadoop.fs.RawLocalFileSystem.getFileStatus(RawLocalFileSystem.java:601)
at org.apache.hadoop.fs.FilterFileSystem.getFileStatus(FilterFileSystem.java:421)
at org.apache.hadoop.fs.ChecksumFileSystem$ChecksumFSInputChecker.<init>(ChecksumFileSystem.java:142)
at org.apache.hadoop.fs.ChecksumFileSystem.open(ChecksumFileSystem.java:346)
at org.apache.hadoop.fs.FileSystem.open(FileSystem.java:769)
at org.apache.hadoop.mapred.LineRecordReader.<init>(LineRecordReader.java:109)
at org.apache.hadoop.mapred.TextInputFormat.getRecordReader(TextInputFormat.java:67)
at org.apache.spark.rdd.HadoopRDD$$anon$1.liftedTree1$1(HadoopRDD.scala:257)
at org.apache.spark.rdd.HadoopRDD$$anon$1.<init>(HadoopRDD.scala:256)
at org.apache.spark.rdd.HadoopRDD.compute(HadoopRDD.scala:214)
at org.apache.spark.rdd.HadoopRDD.compute(HadoopRDD.scala:94)
at org.apache.spark.rdd.RDD.computeOrReadCheckpoint(RDD.scala:324)
...


How can I add this JohnSnowLabs spelling check pretrained model in Zeppelin? The above code works when directly ran on the Spark-shell.










share|improve this question

























  • Isn't that configuration problem unrelated to Zeppelin? I'd guess that you use cluster, but default file system somehow resolves to a local one.

    – user10465355
    Nov 22 '18 at 20:31
















0















I want to use the JohnSnowLabs pretrained spell check module in my Zeppelin notebook. As mentioned here I have added com.johnsnowlabs.nlp:spark-nlp_2.11:1.7.3 to the Zeppelin dependency section as shown below:



enter image description here



However, when I try to run the following simple code



import com.johnsnowlabs.nlp.DocumentAssembler
import com.johnsnowlabs.nlp.annotator.NorvigSweetingModel
import com.johnsnowlabs.nlp.annotators.Tokenizer
import org.apache.spark.ml.Pipeline
import com.johnsnowlabs.nlp.Finisher

val df = Seq("tiolt cde", "eefg efa efb").toDF("names")

val nlpPipeline = new Pipeline().setStages(Array(
new DocumentAssembler().setInputCol("names").setOutputCol("document"),
new Tokenizer().setInputCols("document").setOutputCol("tokens"),
NorvigSweetingModel.pretrained().setInputCols("tokens").setOutputCol("corrected"),
new Finisher().setInputCols("corrected")
))

df.transform(df => nlpPipeline.fit(df).transform(df)).show(false)


it gives an error as follows:



org.apache.spark.SparkException: Job aborted due to stage failure: Task 0 in stage 0.0 failed 4 times, most recent failure: Lost task 0.3 in stage 0.0 (TID 3, xxx.xxx.xxx.xxx, executor 0): java.io.FileNotFoundException: File file:/root/cache_pretrained/spell_fast_en_1.6.2_2_1534781328404/metadata/part-00000 does not exist
at org.apache.hadoop.fs.RawLocalFileSystem.deprecatedGetFileStatus(RawLocalFileSystem.java:611)
at org.apache.hadoop.fs.RawLocalFileSystem.getFileLinkStatusInternal(RawLocalFileSystem.java:824)
at org.apache.hadoop.fs.RawLocalFileSystem.getFileStatus(RawLocalFileSystem.java:601)
at org.apache.hadoop.fs.FilterFileSystem.getFileStatus(FilterFileSystem.java:421)
at org.apache.hadoop.fs.ChecksumFileSystem$ChecksumFSInputChecker.<init>(ChecksumFileSystem.java:142)
at org.apache.hadoop.fs.ChecksumFileSystem.open(ChecksumFileSystem.java:346)
at org.apache.hadoop.fs.FileSystem.open(FileSystem.java:769)
at org.apache.hadoop.mapred.LineRecordReader.<init>(LineRecordReader.java:109)
at org.apache.hadoop.mapred.TextInputFormat.getRecordReader(TextInputFormat.java:67)
at org.apache.spark.rdd.HadoopRDD$$anon$1.liftedTree1$1(HadoopRDD.scala:257)
at org.apache.spark.rdd.HadoopRDD$$anon$1.<init>(HadoopRDD.scala:256)
at org.apache.spark.rdd.HadoopRDD.compute(HadoopRDD.scala:214)
at org.apache.spark.rdd.HadoopRDD.compute(HadoopRDD.scala:94)
at org.apache.spark.rdd.RDD.computeOrReadCheckpoint(RDD.scala:324)
...


How can I add this JohnSnowLabs spelling check pretrained model in Zeppelin? The above code works when directly ran on the Spark-shell.










share|improve this question

























  • Isn't that configuration problem unrelated to Zeppelin? I'd guess that you use cluster, but default file system somehow resolves to a local one.

    – user10465355
    Nov 22 '18 at 20:31














0












0








0








I want to use the JohnSnowLabs pretrained spell check module in my Zeppelin notebook. As mentioned here I have added com.johnsnowlabs.nlp:spark-nlp_2.11:1.7.3 to the Zeppelin dependency section as shown below:



enter image description here



However, when I try to run the following simple code



import com.johnsnowlabs.nlp.DocumentAssembler
import com.johnsnowlabs.nlp.annotator.NorvigSweetingModel
import com.johnsnowlabs.nlp.annotators.Tokenizer
import org.apache.spark.ml.Pipeline
import com.johnsnowlabs.nlp.Finisher

val df = Seq("tiolt cde", "eefg efa efb").toDF("names")

val nlpPipeline = new Pipeline().setStages(Array(
new DocumentAssembler().setInputCol("names").setOutputCol("document"),
new Tokenizer().setInputCols("document").setOutputCol("tokens"),
NorvigSweetingModel.pretrained().setInputCols("tokens").setOutputCol("corrected"),
new Finisher().setInputCols("corrected")
))

df.transform(df => nlpPipeline.fit(df).transform(df)).show(false)


it gives an error as follows:



org.apache.spark.SparkException: Job aborted due to stage failure: Task 0 in stage 0.0 failed 4 times, most recent failure: Lost task 0.3 in stage 0.0 (TID 3, xxx.xxx.xxx.xxx, executor 0): java.io.FileNotFoundException: File file:/root/cache_pretrained/spell_fast_en_1.6.2_2_1534781328404/metadata/part-00000 does not exist
at org.apache.hadoop.fs.RawLocalFileSystem.deprecatedGetFileStatus(RawLocalFileSystem.java:611)
at org.apache.hadoop.fs.RawLocalFileSystem.getFileLinkStatusInternal(RawLocalFileSystem.java:824)
at org.apache.hadoop.fs.RawLocalFileSystem.getFileStatus(RawLocalFileSystem.java:601)
at org.apache.hadoop.fs.FilterFileSystem.getFileStatus(FilterFileSystem.java:421)
at org.apache.hadoop.fs.ChecksumFileSystem$ChecksumFSInputChecker.<init>(ChecksumFileSystem.java:142)
at org.apache.hadoop.fs.ChecksumFileSystem.open(ChecksumFileSystem.java:346)
at org.apache.hadoop.fs.FileSystem.open(FileSystem.java:769)
at org.apache.hadoop.mapred.LineRecordReader.<init>(LineRecordReader.java:109)
at org.apache.hadoop.mapred.TextInputFormat.getRecordReader(TextInputFormat.java:67)
at org.apache.spark.rdd.HadoopRDD$$anon$1.liftedTree1$1(HadoopRDD.scala:257)
at org.apache.spark.rdd.HadoopRDD$$anon$1.<init>(HadoopRDD.scala:256)
at org.apache.spark.rdd.HadoopRDD.compute(HadoopRDD.scala:214)
at org.apache.spark.rdd.HadoopRDD.compute(HadoopRDD.scala:94)
at org.apache.spark.rdd.RDD.computeOrReadCheckpoint(RDD.scala:324)
...


How can I add this JohnSnowLabs spelling check pretrained model in Zeppelin? The above code works when directly ran on the Spark-shell.










share|improve this question
















I want to use the JohnSnowLabs pretrained spell check module in my Zeppelin notebook. As mentioned here I have added com.johnsnowlabs.nlp:spark-nlp_2.11:1.7.3 to the Zeppelin dependency section as shown below:



enter image description here



However, when I try to run the following simple code



import com.johnsnowlabs.nlp.DocumentAssembler
import com.johnsnowlabs.nlp.annotator.NorvigSweetingModel
import com.johnsnowlabs.nlp.annotators.Tokenizer
import org.apache.spark.ml.Pipeline
import com.johnsnowlabs.nlp.Finisher

val df = Seq("tiolt cde", "eefg efa efb").toDF("names")

val nlpPipeline = new Pipeline().setStages(Array(
new DocumentAssembler().setInputCol("names").setOutputCol("document"),
new Tokenizer().setInputCols("document").setOutputCol("tokens"),
NorvigSweetingModel.pretrained().setInputCols("tokens").setOutputCol("corrected"),
new Finisher().setInputCols("corrected")
))

df.transform(df => nlpPipeline.fit(df).transform(df)).show(false)


it gives an error as follows:



org.apache.spark.SparkException: Job aborted due to stage failure: Task 0 in stage 0.0 failed 4 times, most recent failure: Lost task 0.3 in stage 0.0 (TID 3, xxx.xxx.xxx.xxx, executor 0): java.io.FileNotFoundException: File file:/root/cache_pretrained/spell_fast_en_1.6.2_2_1534781328404/metadata/part-00000 does not exist
at org.apache.hadoop.fs.RawLocalFileSystem.deprecatedGetFileStatus(RawLocalFileSystem.java:611)
at org.apache.hadoop.fs.RawLocalFileSystem.getFileLinkStatusInternal(RawLocalFileSystem.java:824)
at org.apache.hadoop.fs.RawLocalFileSystem.getFileStatus(RawLocalFileSystem.java:601)
at org.apache.hadoop.fs.FilterFileSystem.getFileStatus(FilterFileSystem.java:421)
at org.apache.hadoop.fs.ChecksumFileSystem$ChecksumFSInputChecker.<init>(ChecksumFileSystem.java:142)
at org.apache.hadoop.fs.ChecksumFileSystem.open(ChecksumFileSystem.java:346)
at org.apache.hadoop.fs.FileSystem.open(FileSystem.java:769)
at org.apache.hadoop.mapred.LineRecordReader.<init>(LineRecordReader.java:109)
at org.apache.hadoop.mapred.TextInputFormat.getRecordReader(TextInputFormat.java:67)
at org.apache.spark.rdd.HadoopRDD$$anon$1.liftedTree1$1(HadoopRDD.scala:257)
at org.apache.spark.rdd.HadoopRDD$$anon$1.<init>(HadoopRDD.scala:256)
at org.apache.spark.rdd.HadoopRDD.compute(HadoopRDD.scala:214)
at org.apache.spark.rdd.HadoopRDD.compute(HadoopRDD.scala:94)
at org.apache.spark.rdd.RDD.computeOrReadCheckpoint(RDD.scala:324)
...


How can I add this JohnSnowLabs spelling check pretrained model in Zeppelin? The above code works when directly ran on the Spark-shell.







apache-spark apache-zeppelin johnsnowlabs-spark-nlp






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share|improve this question













share|improve this question




share|improve this question








edited Nov 29 '18 at 22:21









halfer

14.6k758113




14.6k758113










asked Nov 22 '18 at 10:49









user3243499user3243499

81411226




81411226













  • Isn't that configuration problem unrelated to Zeppelin? I'd guess that you use cluster, but default file system somehow resolves to a local one.

    – user10465355
    Nov 22 '18 at 20:31



















  • Isn't that configuration problem unrelated to Zeppelin? I'd guess that you use cluster, but default file system somehow resolves to a local one.

    – user10465355
    Nov 22 '18 at 20:31

















Isn't that configuration problem unrelated to Zeppelin? I'd guess that you use cluster, but default file system somehow resolves to a local one.

– user10465355
Nov 22 '18 at 20:31





Isn't that configuration problem unrelated to Zeppelin? I'd guess that you use cluster, but default file system somehow resolves to a local one.

– user10465355
Nov 22 '18 at 20:31












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