How to select components in s4 class like components in ordinary lists?












1















in R it is possible to create a list



k <- list()
k[[1]] <- airquality
k[[2]] <- rock
k[[3]] <- AirPassengers
k[[4]] <- airmiles
k[[5]] <- trees
k[[6]] <- treering


and selecting it with



k[c(1:3,6)]


How it is possible to do same in S4 class?



for example I create the some data from dismo package:



library(dismo)
example(voronoi)


that performs following:



p <- matrix(c(17, 42, 85, 70, 19, 53, 26, 84, 84, 46, 48, 85, 4, 95, 48, 54, 66, 74, 50, 48, 
28, 73, 38, 56, 43, 29, 63, 22, 46, 45, 7, 60, 46, 34, 14, 51, 70, 31, 39, 26), ncol=2)

v <- voronoi(p)
v


I want to select the coordinates of a polygon, it can be done with.



v@polygons[[1]]@Polygons[[1]]@coords.


My question is How to select for example 1 to 3rd and sixth component?



my idea to use



v@polygons[c(1:3,6)]@Polygons[[1]]@coords


does not work. R says:



Error: trying to get slot "Polygons" from an object of a basic class ("list") with no slots









share|improve this question





























    1















    in R it is possible to create a list



    k <- list()
    k[[1]] <- airquality
    k[[2]] <- rock
    k[[3]] <- AirPassengers
    k[[4]] <- airmiles
    k[[5]] <- trees
    k[[6]] <- treering


    and selecting it with



    k[c(1:3,6)]


    How it is possible to do same in S4 class?



    for example I create the some data from dismo package:



    library(dismo)
    example(voronoi)


    that performs following:



    p <- matrix(c(17, 42, 85, 70, 19, 53, 26, 84, 84, 46, 48, 85, 4, 95, 48, 54, 66, 74, 50, 48, 
    28, 73, 38, 56, 43, 29, 63, 22, 46, 45, 7, 60, 46, 34, 14, 51, 70, 31, 39, 26), ncol=2)

    v <- voronoi(p)
    v


    I want to select the coordinates of a polygon, it can be done with.



    v@polygons[[1]]@Polygons[[1]]@coords.


    My question is How to select for example 1 to 3rd and sixth component?



    my idea to use



    v@polygons[c(1:3,6)]@Polygons[[1]]@coords


    does not work. R says:



    Error: trying to get slot "Polygons" from an object of a basic class ("list") with no slots









    share|improve this question



























      1












      1








      1








      in R it is possible to create a list



      k <- list()
      k[[1]] <- airquality
      k[[2]] <- rock
      k[[3]] <- AirPassengers
      k[[4]] <- airmiles
      k[[5]] <- trees
      k[[6]] <- treering


      and selecting it with



      k[c(1:3,6)]


      How it is possible to do same in S4 class?



      for example I create the some data from dismo package:



      library(dismo)
      example(voronoi)


      that performs following:



      p <- matrix(c(17, 42, 85, 70, 19, 53, 26, 84, 84, 46, 48, 85, 4, 95, 48, 54, 66, 74, 50, 48, 
      28, 73, 38, 56, 43, 29, 63, 22, 46, 45, 7, 60, 46, 34, 14, 51, 70, 31, 39, 26), ncol=2)

      v <- voronoi(p)
      v


      I want to select the coordinates of a polygon, it can be done with.



      v@polygons[[1]]@Polygons[[1]]@coords.


      My question is How to select for example 1 to 3rd and sixth component?



      my idea to use



      v@polygons[c(1:3,6)]@Polygons[[1]]@coords


      does not work. R says:



      Error: trying to get slot "Polygons" from an object of a basic class ("list") with no slots









      share|improve this question
















      in R it is possible to create a list



      k <- list()
      k[[1]] <- airquality
      k[[2]] <- rock
      k[[3]] <- AirPassengers
      k[[4]] <- airmiles
      k[[5]] <- trees
      k[[6]] <- treering


      and selecting it with



      k[c(1:3,6)]


      How it is possible to do same in S4 class?



      for example I create the some data from dismo package:



      library(dismo)
      example(voronoi)


      that performs following:



      p <- matrix(c(17, 42, 85, 70, 19, 53, 26, 84, 84, 46, 48, 85, 4, 95, 48, 54, 66, 74, 50, 48, 
      28, 73, 38, 56, 43, 29, 63, 22, 46, 45, 7, 60, 46, 34, 14, 51, 70, 31, 39, 26), ncol=2)

      v <- voronoi(p)
      v


      I want to select the coordinates of a polygon, it can be done with.



      v@polygons[[1]]@Polygons[[1]]@coords.


      My question is How to select for example 1 to 3rd and sixth component?



      my idea to use



      v@polygons[c(1:3,6)]@Polygons[[1]]@coords


      does not work. R says:



      Error: trying to get slot "Polygons" from an object of a basic class ("list") with no slots






      r






      share|improve this question















      share|improve this question













      share|improve this question




      share|improve this question








      edited Nov 20 '18 at 14:11









      John Coleman

      34.3k53272




      34.3k53272










      asked Nov 20 '18 at 14:06









      smurfit89smurfit89

      82212




      82212
























          1 Answer
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          The problem isn't with v@polygons[c(1:3,6)] but rather in the attempt to apply @Polygons[[1]]@coords directly to the resulting list. instead, you could use lapply() on v@polygons[c(1:3,6)] like this:



          result <- lapply(v@polygons[c(1:3,6)], function(x) x@Polygons[[1]]@coords)


          which works as expected.






          share|improve this answer
























          • But I am still wondering why this information is not in the documentation

            – smurfit89
            Nov 20 '18 at 14:28











          Your Answer






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          1 Answer
          1






          active

          oldest

          votes








          1 Answer
          1






          active

          oldest

          votes









          active

          oldest

          votes






          active

          oldest

          votes









          2














          The problem isn't with v@polygons[c(1:3,6)] but rather in the attempt to apply @Polygons[[1]]@coords directly to the resulting list. instead, you could use lapply() on v@polygons[c(1:3,6)] like this:



          result <- lapply(v@polygons[c(1:3,6)], function(x) x@Polygons[[1]]@coords)


          which works as expected.






          share|improve this answer
























          • But I am still wondering why this information is not in the documentation

            – smurfit89
            Nov 20 '18 at 14:28
















          2














          The problem isn't with v@polygons[c(1:3,6)] but rather in the attempt to apply @Polygons[[1]]@coords directly to the resulting list. instead, you could use lapply() on v@polygons[c(1:3,6)] like this:



          result <- lapply(v@polygons[c(1:3,6)], function(x) x@Polygons[[1]]@coords)


          which works as expected.






          share|improve this answer
























          • But I am still wondering why this information is not in the documentation

            – smurfit89
            Nov 20 '18 at 14:28














          2












          2








          2







          The problem isn't with v@polygons[c(1:3,6)] but rather in the attempt to apply @Polygons[[1]]@coords directly to the resulting list. instead, you could use lapply() on v@polygons[c(1:3,6)] like this:



          result <- lapply(v@polygons[c(1:3,6)], function(x) x@Polygons[[1]]@coords)


          which works as expected.






          share|improve this answer













          The problem isn't with v@polygons[c(1:3,6)] but rather in the attempt to apply @Polygons[[1]]@coords directly to the resulting list. instead, you could use lapply() on v@polygons[c(1:3,6)] like this:



          result <- lapply(v@polygons[c(1:3,6)], function(x) x@Polygons[[1]]@coords)


          which works as expected.







          share|improve this answer












          share|improve this answer



          share|improve this answer










          answered Nov 20 '18 at 14:21









          John ColemanJohn Coleman

          34.3k53272




          34.3k53272













          • But I am still wondering why this information is not in the documentation

            – smurfit89
            Nov 20 '18 at 14:28



















          • But I am still wondering why this information is not in the documentation

            – smurfit89
            Nov 20 '18 at 14:28

















          But I am still wondering why this information is not in the documentation

          – smurfit89
          Nov 20 '18 at 14:28





          But I am still wondering why this information is not in the documentation

          – smurfit89
          Nov 20 '18 at 14:28


















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